RNA Sequencing Services

CD Genomics provide a full range of RNA sequencing services to help analyze the gene expression patterns, examine changes in the transcriptome, and detect novel RNA molecules, mutations, and gene fusions, enabling a deeper understanding of RNA biology and disease development. In addition to NGS, we provide a long-read sequencing-based method (iso-seq) for full-length transcript sequencing, avoiding errors that can occur with NGS approaches.

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What is RNA sequencing

RNA sequencing (RNA-seq) is a technique that examines the sequences and quantity of RNA molecules in a biological sample using next generation sequencing (NGS). Next-generation sequencing technologies have the advantages of high throughput, high sensitivity, and high speed. RNA-seq is a rather unbiased method for analysis of the transcriptome, with single-nucleotide resolution and a tremendous dynamic detection range (>8,000 fold). RNA-seq is now being widely applied in biomedical research for the characterization of the transcriptome. The experimental workflow of RNA-seq consists of RNA isolation, cDNA library construction, and deep sequencing. RNA-seq allows for the quantification of the abundance level or relative alterations of each transcript under specific conditions or during defined developmental stages.

Researchers across the world continue to trust us for over a decade, and we continue to deliver on their trust

Leading universities, research institutions, and pharmaceutical companies across the world continue to trust us for over a decade, and we continue to deliver on their trust

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Features Service Portfolio Platforms Application Sample Requirement Demo & Publication Publication Download Inquiry

How Our Service Portfolio Supports Your Research

Explore how RNA sequencing helps researchers understand RNA dynamics through transcriptomic and bioinformatic insights.

Detect novel transcripts, SNPs, InDels, or other variations

Examine the sequences and quantity of RNA molecules

We provide a full range of RNA sequencing solutions to satisfy your specific needs

Superior data quality: ≥80% bases with ≥Q30, >90% on average

High-quality bioinformatics analysis in an efficient and customizable way

Service Portfolio

Explore how our epitranscriptomics services help researchers map RNA modifications and explore their pathways.

Sequencing Platforms

A wide range of efficient sequencing platforms

  • Illumian HiSeq 2500 / HiSeq 4000 / HiSeq X Ten / NovaSeq 6000 / NextSeq 500 / MiSeq
  • PacBio RS II / Sequel
  • Nanopore PromethION
  • 10X Genomics
Learn more about a wide range of efficient sequencing platforms.

Application of RNA-Seq

Cancer Transcriptomics

Tumor Classification: It aids in understanding tumor classification and progression by monitoring gene expression and transcriptome changes.
Driver Mutations: RNA-Seq helps identify mutations that drive cancer initiation and progression, distinguishing them from passenger mutations.
Pathway Analysis: It reveals pathways that are up- or down-regulated in cancer, providing crucial information for identifying molecular targets for precision therapeutics.
Cancer Subtypes: Transcriptomic differences between cancer samples and non-cancerous tissue help differentiate cancer subtypes and assess the impact of mutations.
Intratumor Heterogeneity: RNA-Seq can investigate intratumor transcriptomic diversity, providing insights into tumor evolution and metastasis.

Population Genetics

Genetic Principal Components: RNAseq-based genetic principal components (RG-PCs) can capture subpopulations within a dataset, comparable to array-based genotypes.
Diverse Populations: It has been used to study genetic structure in diverse populations, such as understudied Nepalese populations.
Evolutionary Biology: RNA-Seq contributes to research in population genetics and evolutionary biology.

Pharmacogenomics Applications

Biomarker Discovery: RNA-Seq can be used for biomarker discovery, which is crucial in pharmacogenomics.
Drug Response: Transcriptomic profiles can potentially predict drug responses and help in personalizing treatments.

Agricultural Applications

Crop Improvement: It helps identify genes that could improve yield and resilience through engineering, breeding, and seed selection.
Stress Response: RNA-Seq aids in understanding plant responses to pathogens, heat, or drought, helping develop more resilient crops.
Developmental Programs: It unravels developmental programs during plant growth.
Comparative Studies: RNA-Seq has been used to identify differences in gene expression between domesticated grains and their wild relatives

Sample Submission

Sample type
Cells
Tissue: fresh- frozen, stabilized or FFPE
Blood
Biofluids: serum, plasma (EDTA and citrate), urine, cell media,
exosomes, buccal swabs, saliva, cerebral spinal fluid, stool
Other

Deliverables

The original sequencing data

Experimental results

Data analysis report

Details in Bacterial RNA Sequencing for your writing (customization)

Publication form CD Genomics

References:

  1. Han Y, Gao S, Muegge K, et al. Advanced applications of RNA sequencing and challenges. Bioinformatics and biology insights, 2015, 9: BBI. S28991.


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