Transcriptome Sequencing And Data Analysis Service

CD Genomics offers services on the revolutionizing study of the transcriptome, the RNA  sequencing. Whether you are targeting to understand previously undetected changes happening in diseases states and responses to therapeutics, or changes under different environmental conditions, CD Genomics provides highly sensitive and accurate tool for measuring such expressions across the transcriptome. The CD Genomics researches are ready to help you detect both known and novel features without limitation to prior knowledge using different RNA sequencing services, epitranscriptomics services, non-coding sequencing services, biofluid profiling, and many more.

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Leading universities, research institutions, and pharmaceutical companies across the world continue to trust us for over a decade, and we continue to deliver on their trust

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CD Genomics' Advanced RNA Sequencing Solutions Trusted by Leading Researchers

CD Genomics offers in-depth, intuitive functionalities and features to help you conduct and scale complex transcriptome sequencing and analysis, enabling you to uncover valuable insights into gene expression.

Committed to Providing High-Quality Results

CD Genomics is not only focused on providing various sequencing methods to cover the broad range of researches but also committed to yield high-quality results with the use of the latest technologies released in the market.

Team of Experienced and Expert Scientists

CD Genomics is composed of experienced and expert scientists who ensures the yield of high quality and accurate results for the researches of our dear customers.

Customer Oriented

CD Genomics listens to its customers, from suggestions and requests to feedbacks upon receiving the results. We truly value our customers providing beyond expected service quality while considering their budget and deadline.

Takes Challenges

CD Genomics is leaned towards upgrades and improvements, thus accepting complicated and challenging samples.

RNA Sequencing Epitranscriptomics ncRNA-seq Protein-RNA Interactions Long-Read RNA Sequencing RNA Bioinformatics

Transcriptome Service Portfolio

Explore how our RNA sequencing services help researchers profile RNA and explore their pathways.

Comprehensive RNA Sequencing Services for Cutting-Edge Research

CD Genomics offers comprehensive RNA sequencing using Next Generation Sequencing technologies.

Key Features of Our RNA Sequencing Services:

High-Quality Data
≥80% bases with ≥Q30, ensuring superior data quality.
Comprehensive Analysis
From total RNA-Seq to single-cell RNA-Seq, we provide deep insights into transcriptomic profiles.
Customizable Solutions
Tailored to meet the unique needs of your project, from targeted RNA sequencing to full-length transcript analysis using Iso-Seq.

Optimized for Performance & Scalability:

Efficient Data Processing
Our state-of-the-art bioinformatics pipeline offers high-speed, high-sensitivity analysis that supports large-scale studies.
Advanced Tools for Deep Insights
From differential gene expression analysis to alternative splicing, explore RNA dynamics with our robust suite of analytical tools.

Explore RNA Sequencing Service Portfolio

Advanced Epitranscriptomics Services for RNA Modification Analysis

CD Genomics also provides several epitranscriptonomic sequencing services such as m6A profiling which involves the most common modification in internal mRNA.

Key Features of Our Epitranscriptomics Services:

Single-Base Resolution
Detect RNA modifications with high accuracy at a single-nucleotide level.
Wide Coverage
Explore a variety of RNA molecules, including mRNA, lncRNA, tRNA, rRNA, and pri-miRNA.
Fast Turnaround Times
Rigorous quality control ensures quick, reliable results for your research.
Customizable Bioinformatics Analysis
Our expert team provides efficient, tailored analysis to meet your specific research needs.

Optimized for Cutting-Edge Research:

High-Throughput Sequencing
Gain comprehensive insights with high-throughput sequencing methods that deliver extensive data on RNA modifications.
Advanced Analytical Tools
Explore multiple modification types simultaneously with services like m7G+m3C sequencing and m6A profiling for in-depth molecular mapping.

Start Mapping RNA Modifications Today!

ncRNA-seq for Comprehensive Transcriptomic Analysis

The Non-coding RNA sequencing services offered by CD Genomics ranges from long to short, as well as circular non-coding RNA sequencing.

Key Features of Our ncRNA Sequencing Services:

Detect Novel ncRNAs
Discover new non-coding RNA species and identify potential biomarkers.
High Data Quality
Achieve superior sequencing quality with ≥80% bases at ≥Q30 and >90% on average.
Comprehensive Analysis
Tailored bioinformatics analysis to suit your specific research needs and ensure accurate results.
Wide Range of ncRNA Profiling
From long RNA and circRNA to small RNA, miRNA, and piRNA, we offer specialized sequencing solutions for each RNA class.

Optimized for Complex RNA Profiling:

Long RNA-Seq
For comprehensive profiling of lncRNAs, circRNAs, and mRNAs to understand gene regulation mechanisms.
Small RNA-Seq
Profiling of miRNAs, siRNAs, piRNAs, and more, with options for UMI-based quantification to reduce PCR bias.
Bacterial Small RNA-Seq
Detect novel bacterial small RNAs to explore microbial gene regulation.

Unlock the full potential of ncRNA research with CD Genomics, and gain deeper insights into the regulatory roles of ncRNAs in health, disease, and development.

Explore ncRNA Dynamics Now!

Comprehensive Protein-RNA Interaction Analysis for Molecular Insights

Key Features of Our Protein-RNA Interaction Services:

High Coverage & Sensitivity
Detect and profile protein binding sites across the entire transcriptome.
Comprehensive Bioinformatics Analysis
Tailored bioinformatics pipelines that offer data visualization, peak calling, motif search, differential binding analysis, and more.
One-Stop Solution
From sample preparation to library construction, sequencing, and data analysis, we provide a seamless workflow to accelerate your research.

Explore the Power of Protein-RNA Interactions:

Our platform supports the study of both coding and non-coding RNAs (e.g., lncRNAs, miRNAs, snoRNAs), allowing for the exploration of complex gene regulation mechanisms such as RNA-protein recognition, gene expression facilitation, and RNA modification impacts. Whether you're investigating cellular homeostasis, disease mechanisms, or RNA drug design, our services provide the essential data to advance your projects.

Unravel RNA-Protein Interactions!

Unlock the Power of Long-Read RNA Sequencing

Key Advantages of Long-Read RNA Sequencing:

Single-Base Resolution
Achieve highly accurate analysis at the individual base level with minimal alignment errors.
Identification of Novel Transcripts
Discover new transcripts and alternative splicing events that were previously challenging to detect.
Structural Variants and Repetitive Regions
Resolve structural variants and complex genomic regions, including repetitive sequences, with precision.
Direct Real-Time Analysis
Benefit from real-time sequencing with Nanopore technology, which offers ultra-long read lengths, allowing you to analyze long RNA fragments in a short sequencing time.

Service Portfolio:

Unlock the complete view of transcriptomes by accurately detecting structural variations and providing more comprehensive genetic data.
Achieve ultra-long read sequencing for novel transcriptomics and enhance existing reference transcriptomes.
Detect RNA modifications across the entire transcriptome with single-base resolution, enabling detailed analysis of epitranscriptomic changes.

Accelerate Your RNA Research with Long-Read Sequencing

Whether you're exploring new diseases, refining reference transcriptomes, or investigating alternative splicing, CD Genomics' Long-Read RNA Sequencing services provide the tools you need to uncover deeper biological insights.

Start Mapping Long-Read RNA Sequencing!

Expert Bioinformatics Analysis

At CD Genomics, we not only offer cutting-edge RNA sequencing services, but we also provide comprehensive RNA Bioinformatics analysis to maximize the insights from your genomic, transcriptomic, and epigenomic data.

Key Bioinformatics Services:

Data Quality Control and Annotation
Ensure the highest data accuracy and integrity with comprehensive QC and detailed annotation.
Differential Expression & Functional Analysis
Discover gene expression patterns, identify differentially expressed genes, and uncover key biological insights.
Alternative Splicing & Regulatory Network Analysis
Gain insights into gene regulation and splicing events, and explore complex RNA-protein interactions.
Epigenomics and RNA Modifications Analysis
Analyze the dynamic epitranscriptome and regulatory modifications at a deep, molecular level.

What We Offer:

Comprehensive Analysis
From abiotic and biotic stress to therapeutic responses, our bioinformatics expertise spans a wide range of biological processes.
Data Security & Confidentiality
We ensure a secure, confidential process for all data exchanges, providing peace of mind throughout your project.
Deliverables
FastQ, BAM, coverage summaries, QC reports, and custom bioinformatics analysis reports are all part of our service to help you make data-driven decisions.

Proven Expertise in RNA Data Analysis:

Whether you're studying cancer transcriptomics, drug development, or agricultural applications, CD Genomics' RNA Bioinformatics services empower you to explore, interpret, and visualize your data with unparalleled clarity.

Let Us Help You Navigate the Complexities of RNA Data

Sequencing Platform

MiSeq

NextSeq 500

NovaSeq 6000

Hiseq X Ten

Learn more about a wide range of efficient sequencing platforms.

Unlock Comprehensive Insights with Our RNA Sequencing Sample Report

Download our RNA sequencing sample report to explore detailed, publication-ready analysis of your RNA data. Our final report, delivered via cloud solution or on a hard drive, includes:

An easy-to-read data summary

A clear description of the project, quality assessments of your samples, and a thorough overview of the data analysis results, complete with publication-grade illustrations.

A fully annotated data analysis file

Ready for publication or to conduct your further analysis, offering deep insights into gene expression, alternative splicing, and more.

A materials and methods section

Preformatted for seamless inclusion in your publication.

Encrypted raw data

Including FASTQ and BAM files, ensuring full transparency and reproducibility.

What Our Customers Say About Us

"CD Genomics has been an invaluable partner for our research. Their RNA-Seq service not only delivered high-quality results that exceeded our expectations but also provided us with detailed insights into the gene expression changes associated with neurodegenerative disease progression. From the very first step, the team was highly professional, offering clear guidance and support throughout the process. The bioinformatics analysis was especially impressive, providing us with in-depth insights that were essential for our study. We also appreciated the quick turnaround time and the dedicated customer support. Thanks to CD Genomics, we were able to accelerate our research and achieve our project goals."

Dr. Johannes Müller

Professor of Molecular Biology, Germany

What Our Customers Say About Us

"We have been working with CD Genomics for several years on projects involving cancer immunotherapy. The team is always responsive and willing to go the extra mile to ensure the success of our projects. The quality of the data and the speed of the service are second to none. We particularly appreciate their customized bioinformatics analysis, which has helped us to draw more meaningful conclusions from our data. CD Genomics is a key partner in our research, and I would highly recommend their services."

Dr. Emily Richards

Senior Research Scientist, Stanford University, USA

Popular RNA Sequencing Services

Application of Transcriptome Sequencing

We understand the significance of your blood RNA sequencing projects. That's why we ensure your samples are handled with the utmost care, utilizing advanced workflows and cutting-edge sequencing technologies to deliver precise and reliable results. With our tailored bioinformatics analysis, your research data will be actionable, helping you discover new biomarkers, gene variants, and therapeutic targets.

CD Genomics offers biofluid profiling services powered by advanced sequencing technologies. Our biofluid sequencing pipeline includes a global network of platforms, including Illumina, PacBio, and Nanopore, ensuring high-quality, reliable results. We support seamless data integration and analysis, with secure cloud storage across multiple regions, ensuring your data is always protected and easily accessible for further research.

Enhance your research with our FFPE RNA-Seq service

Benefit from a seamless process that includes expert sample preparation, high-throughput sequencing, and customized bioinformatics analysis. Our team is here to guide you at every step, ensuring the integrity of your data and helping you uncover valuable insights from challenging FFPE samples.

Supporting your research in inherited disease genetics

With our optimized RNA sequencing workflows, including mRNA, lncRNA, circRNA, and miRNA sequencing, CD Genomics ensures precise gene expression profiling in diverse sample types. Whether you’re researching cystic fibrosis, autism, epilepsy, or other inherited conditions, we provide accurate and reliable results for biomarker discovery, gene identification, and drug research. Our professional team will guide you through every step of the process, delivering insights that drive your research forward.

Our RNA sequencing services, including mRNA, small RNA, lncRNA, circRNA, and single-cell RNA sequencing, offer a complete solution for cancer research. We utilize top-tier platforms like Illumina, PacBio, 10x Genomics, and Nanopore to provide accurate and high-quality sequencing results. Our bioinformatics expertise ensures that you can uncover critical information related to tumor heterogeneity, cancer biomarkers, and therapeutic targets.

RNA plays a critical role in storing, processing, and transmitting genetic information. Beyond mRNA, non-coding RNAs (ncRNAs) like miRNAs, lncRNAs, and circRNAs are increasingly recognized as powerful biomarkers due to their stability and functional significance. CD Genomics provides a complete RNA sequencing service using cutting-edge platforms such as Illumina, PacBio, and Nanopore, ensuring precise and comprehensive biomarker discovery. Our bioinformatics support offers in-depth analysis, including gene expression, splicing variation, and ncRNA interactions to push your research forward.

Accelerate Drug Discovery with High-Throughput Gene Expression Screening

CD Genomics offers high-throughput gene expression screening using next-generation sequencing (NGS) platforms and Digital RNA Sequencing (UMI RNA-Seq) to provide fast, cost-effective gene expression data. By integrating Unique Molecular Identifiers (UMIs), this method reduces library preparation time and cost, enabling rapid, large-scale drug screening and cellular response studies. Whether you are investigating compound mechanisms, drug efficacy, or therapeutic responses, our screening service provides reliable and high-resolution data, allowing you to move your projects forward with greater efficiency and precision.

Unparalleled Precision in TSS Analysis

CD Genomics offers state-of-the-art, capture-based sequencing solutions for comprehensive, genome-wide transcriptional start site (TSS) analysis. Our advanced technology ensures that every TSS is accurately identified, providing you with a deeper understanding of gene regulation and its role in development and disease. Whether you're investigating disease mechanisms, drug discovery, or biomarker identification, we offer expert support and customized solutions to meet your research needs. Rest assured, your data is handled with the utmost security, giving you the confidence to focus on your scientific discoveries.

General Service Workflow

Sample submission

Sample type
Cells
Tissue: fresh- frozen, stabilized or FFPE
Blood
Biofluids: serum, plasma (EDTA and citrate), urine, cell media,
exosomes, buccal swabs, saliva, cerebral spinal fluid, stool
Other

Frequently Asked Questions

More FAQ on RNA-seq



Inquiry
RNA
Research Areas
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